Abstract: The protein data bank (PDB) currently holds over 140,000 biomolecular structures and continues to release new structures every week. The PDB is an essential resource to the structural ...

Overview Among the powerful new features in Python 3.14 is a new interface for attaching a live debugger to a running Python program. You can inspect the state of a Python app, make changes, ...

This script maps residue numbering and chains between a UniProt ID and a PDB structure. It can also find all structures or the best structure for a protein. I wrote this because I was fed up with the ...

Before diving into the technical aspects, clearly define the objectives and use cases for your programming language. Consider the problems you aim to solve or the unique features you want to introduce ...

Time travel is the biggest thing to happen to debuggers in decades but cannot be used with Python. Companies such as Undo have developed industrial-strength time travel debugging for most ...

Currently, the help message of pdb is not pretty. (Pdb) h a a(rgs) Print the argument list of the current function. (Pdb) a(rgs) is a little bit confusing by itself ...

Streamlit is an open-source Python coding framework for building web-applications or “web-apps” and is now being used by researchers to share large data sets from published studies and other resources ...

I am a software developer focused on creating content through technical writing and documentation. Debugging should not be an afterthought after deploying an application to production. It should be ...