We often describe cinema with subjective adjectives like "gritty," "vibrant," or "chaotic," but a film is fundamentally a high-dimensional data signal—millions of pixels shifting over time. This ...

Single-cell RNA sequencing (scRNA-seq) enables detailed analysis of cellular diversity, but the data’s high dimensionality presents analytical challenges. We compare four dimensionality reduction ...

Are you frustrated with the linear assumptions of Principal Component Analysis (PCA) or losing the global structure and relationships in your data with t-SNE? Leveraging Riemannian geometry, Uniform ...

lmcinnes.umap (Run test suite run_platform_tests linux_py310) lmcinnes.umap (Run test suite run_platform_tests linux_py311) lmcinnes.umap (Run test suite run_platform ...

Sometimes, in the quest for new data, scientists forget that existing datasets can be treasure troves for new discoveries. One such undermined scientific gem is transcriptomic data from the human ...

Cuba legalized same-sex marriage in September. In addition to being an advance in rights, it could also be interpreted as an act of historical justice within a regime that locked up homosexuals in its ...

I don't have a small example because this is being called from a python package, from nextflow, within a docker container. Removing '-u ( i d u ) : (id -g)' from the docker command fixed the issue.

Massively parallel single-cell and single-nucleus RNA sequencing has opened the way to systematic tissue atlases in health and disease, but as the scale of data generation is growing, so is the need ...